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GENKOMB project report

Westholm, Jakub Orzechowski and Ameur, Adam (2003) GENKOMB project report. [SICS Report]

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Abstract

The aim of the GENKOMB project was to find and analyse transcription factor binding sites in the human genome, by correlating expression data for a set of genes with the nucleotide sequences in their upstream regions. This document is a technical description of tools that have been developed and results that have been obtained in the GENKOMB project. Apart from detecting transcription factor binding sites, this project has resulted in programs for matching weight matrices to DNA sequences and multiple alignment of short nucleotide sequences.

Item Type:SICS Report
Uncontrolled Keywords:Genomics, Transcription factor binding sites, Micro array data, Sequence data
ID Code:2326
Deposited By:Vicki Carleson
Deposited On:29 Oct 2007
Last Modified:18 Nov 2009 16:05

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